Yam bean assembly - Revision history

Cassandria at 06:47, 21 November 2022

2022-11-21T06:47:08Z

Philippbayer at 06:12, 26 March 2021

2021-03-26T06:12:11Z

Philippbayer at 13:16, 11 March 2021

2021-03-11T13:16:03Z

Philippbayer at 13:11, 11 March 2021

2021-03-11T13:11:21Z

Cassandria: Created page with "This page provides access to ''The Yam bean'' genome assembly and annotation data for the paper Tay Fernandez et al 2021. Data DOI: Full records of data is viewable and do..."

2021-03-11T03:21:00Z

Created page with "This page provides access to ''The Yam bean'' genome assembly and annotation data for the paper Tay Fernandez et al 2021. Data DOI: Full records of data is viewable and do..."

New page

This page provides access to ''The Yam bean'' genome assembly and annotation data for the paper Tay Fernandez et al 2021.

Data DOI:

Full records of data is viewable and downloadable here:

The draft assembly can be downloaded from:

The predicted genes in proteins, transcripts and CDS can be downloaded from:

@@ Line 1: / Line 1: @@
 This page provides access to ''The Yam bean'' genome assembly and annotation data for the paper Tay Fernandez et al 2021.
-The raw sequencing reads are available at [https://www.ncbi.nlm.nih.gov/bioproject/PRJNA713851 PRJNA713851]
+The raw sequencing reads are available at [https://www.ncbi.nlm.nih.gov/bioproject/PRJNA713851 PRJNA713851] and
 The draft assembly can be downloaded from here:

@@ Line 1: / Line 1: @@
 This page provides access to ''The Yam bean'' genome assembly and annotation data for the paper Tay Fernandez et al 2021.
-The raw sequencing reads are available at BIOPROJ123456789
+The raw sequencing reads are available at [https://www.ncbi.nlm.nih.gov/bioproject/PRJNA713851 PRJNA713851]
 The draft assembly can be downloaded from here:

@@ Line 3: / Line 3: @@
 The raw sequencing reads are available at BIOPROJ123456789
-The draft assembly can be downloaded from <a href='download/yambean.scf.fasta.gz'>here<a/>.
+The draft assembly can be downloaded from here:
-The annotation (GTF) is <a href='download/yambean.scf.fasta.gz'>here</a>, the CDS (fasta) is <a href='download/yambean_cds.fa.gz'>here</a>, the transcripts (fasta) are <a href='download/yambean_transcripts.fa.gz'>here</a>.
+[http://appliedbioinformatics.com.au/download/yambean.scf.fasta.gz yambean.scf.fasta.gz]
-The SNPs (VCF) are <a href='data/yambean.vcf.gz'>here</a>, the final filtered SNPs (VCF) are <a href='download/yambean_filtered.vcf.gz'>here</a>.
+The annotation (GTF) is here: