Difference between revisions of "Plant bioinformatics 2"
From Applied Bioinformatics Group
| (12 intermediate revisions by 2 users not shown) | |||
| Line 3: | Line 3: | ||
This volume in the popular Methods in Molecular Biology series is a follow up to the first edition published in 2007. The first edition proved extremely popular, and for this second edition, I plan to maintain a similar structure. Some chapters will be the same as the original edition, but updated to ensure that they are current, while new chapters will be introduced to reflect changes in plant bioinformatics since 2007. Details of the first edition are available here: http://www.amazon.com/Plant-Bioinformatics-Methods-Protocols-Molecular/dp/1588296539 | This volume in the popular Methods in Molecular Biology series is a follow up to the first edition published in 2007. The first edition proved extremely popular, and for this second edition, I plan to maintain a similar structure. Some chapters will be the same as the original edition, but updated to ensure that they are current, while new chapters will be introduced to reflect changes in plant bioinformatics since 2007. Details of the first edition are available here: http://www.amazon.com/Plant-Bioinformatics-Methods-Protocols-Molecular/dp/1588296539 | ||
| − | A | + | A list of accepted authors and chapter titles is below: |
| − | * | + | *Paul Kersey, Ensembl plants |
| + | *Andrew Sharpe, GbyS - RAD | ||
*Ioannis Xenarios, Uniprot/Swissprot | *Ioannis Xenarios, Uniprot/Swissprot | ||
| − | |||
| − | |||
| − | |||
*Doreen Ware, Gramene | *Doreen Ware, Gramene | ||
| − | |||
| − | |||
| − | |||
| − | |||
*Carolyn Lawrence, MaizeGDB | *Carolyn Lawrence, MaizeGDB | ||
| − | |||
| − | |||
| − | |||
| − | |||
*Philipp Bayer, GbyS skim | *Philipp Bayer, GbyS skim | ||
| − | |||
| − | |||
*Kaitao Lai, wheatgenome.info | *Kaitao Lai, wheatgenome.info | ||
| − | |||
*Micha Bayer, Tablet/Flapjack | *Micha Bayer, Tablet/Flapjack | ||
*Bhavna Hurgobin, Mapping reads with SOAP | *Bhavna Hurgobin, Mapping reads with SOAP | ||
| + | *Klaus Mayer, PlantsDB | ||
| + | *Pradeep Ruperao, TAGdb | ||
| + | *Eric Sayers, Using Genbank | ||
| + | *Sreya Ghosh, Tophat/cufflinks | ||
| + | *Minoru Kanehisa, KEGG | ||
| + | *Pankaj Jaiswal, Plant Ontology | ||
| + | *Jacques Nicolas, Characterising repeats in genomes | ||
| + | *Pankaj Jaiswal, PlantReactome | ||
| + | *Xiaowu Wang, Brassica rapa database | ||
| + | |||
| + | These chapters have now been sent to the publisher. | ||
Latest revision as of 01:40, 2 April 2015
We are currently preparing a second edition of the volume ‘Plant Bioinformatics’ to be published by Humana Press (Springer).
This volume in the popular Methods in Molecular Biology series is a follow up to the first edition published in 2007. The first edition proved extremely popular, and for this second edition, I plan to maintain a similar structure. Some chapters will be the same as the original edition, but updated to ensure that they are current, while new chapters will be introduced to reflect changes in plant bioinformatics since 2007. Details of the first edition are available here: http://www.amazon.com/Plant-Bioinformatics-Methods-Protocols-Molecular/dp/1588296539
A list of accepted authors and chapter titles is below:
- Paul Kersey, Ensembl plants
- Andrew Sharpe, GbyS - RAD
- Ioannis Xenarios, Uniprot/Swissprot
- Doreen Ware, Gramene
- Carolyn Lawrence, MaizeGDB
- Philipp Bayer, GbyS skim
- Kaitao Lai, wheatgenome.info
- Micha Bayer, Tablet/Flapjack
- Bhavna Hurgobin, Mapping reads with SOAP
- Klaus Mayer, PlantsDB
- Pradeep Ruperao, TAGdb
- Eric Sayers, Using Genbank
- Sreya Ghosh, Tophat/cufflinks
- Minoru Kanehisa, KEGG
- Pankaj Jaiswal, Plant Ontology
- Jacques Nicolas, Characterising repeats in genomes
- Pankaj Jaiswal, PlantReactome
- Xiaowu Wang, Brassica rapa database
These chapters have now been sent to the publisher.
