Difference between revisions of "Seagrasses"
Philippbayer (talk | contribs) |
Philippbayer (talk | contribs) |
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MAKER annotation: | MAKER annotation: | ||
| − | GFF of all evidence: [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.gff.gz P_australis_genome_bigger1kbp.all.gff.gz] | + | GFF of all evidence: [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.gff.gz P_australis_genome_bigger1kbp.all.gff.gz] |
| − | GFF of gene models only: [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.gene_models.gff.gz P_australis_genome_bigger1kbp.all.gene_models.gff.gz] | + | GFF of gene models only: [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.gene_models.gff.gz P_australis_genome_bigger1kbp.all.gene_models.gff.gz] |
| − | Proteins (fasta): [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.maker.proteins.fasta.gz P_australis_genome_bigger1kbp.all.maker.proteins.fasta.gz] | + | Proteins (fasta): [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.maker.proteins.fasta.gz P_australis_genome_bigger1kbp.all.maker.proteins.fasta.gz] |
| − | Transcripts/CDS (fasta): [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.maker.transcripts.fasta.gz P_australis_genome_bigger1kbp.all.maker.transcripts.fasta.gz] | + | Transcripts/CDS (fasta): [http://appliedbioinformatics.com.au/download/P_australis_genome_bigger1kbp.all.maker.transcripts.fasta.gz P_australis_genome_bigger1kbp.all.maker.transcripts.fasta.gz] |
| + | |||
| + | == <i>Amphibolis antarctica</i> == | ||
| + | |||
| + | Draft genome assembly: | ||
| + | |||
| + | [http://appliedbioinformatics.com.au/download/A_antarctica_genome_bigger1kbp.fasta.gz A_antarctica_genome_bigger1kbp.fasta.gz] | ||
| + | |||
| + | MAKER annotation: | ||
| + | |||
| + | GFF of all evidence: [http://appliedbioinformatics.com.au/download/A_antarctica_genome_bigger1kbp.all.gff.gz A_antarctica_genome_bigger1kbp.all.gff.gz] | ||
| + | GFF of gene models only: [http://appliedbioinformatics.com.au/download/A_antarctica_genome_bigger1kbp.all.gene_models.gff.gz A_antarctica_genome_bigger1kbp.all.gene_models.gff.gz] | ||
| + | |||
| + | Proteins (fasta): [http://appliedbioinformatics.com.au/download/A_antarctica_genome_bigger1kbp.all.maker.proteins.fasta.gz A_antarctica_genome_bigger1kbp.all.maker.proteins.fasta.gz] | ||
| + | Transcripts/CDS (fasta): [http://appliedbioinformatics.com.au/download/A_antarctica_genome_bigger1kbp.all.maker.transcripts.fasta.gz A_antarctica_genome_bigger1kbp.all.maker.transcripts.fasta.gz] | ||
Revision as of 01:44, 6 May 2022
This page collects assemblies, annotations, and supplementary data for the Amphibolis antarctica and Posidonia australis genome assemblies.
The raw reads are deposited in the SRA under BioProject PRJNA835502
Posidonia australis
Draft genome assembly:
P_australis_genome_bigger1kbp.fasta.gz
MAKER annotation:
GFF of all evidence: P_australis_genome_bigger1kbp.all.gff.gz GFF of gene models only: P_australis_genome_bigger1kbp.all.gene_models.gff.gz
Proteins (fasta): P_australis_genome_bigger1kbp.all.maker.proteins.fasta.gz Transcripts/CDS (fasta): P_australis_genome_bigger1kbp.all.maker.transcripts.fasta.gz
Amphibolis antarctica
Draft genome assembly:
A_antarctica_genome_bigger1kbp.fasta.gz
MAKER annotation:
GFF of all evidence: A_antarctica_genome_bigger1kbp.all.gff.gz GFF of gene models only: A_antarctica_genome_bigger1kbp.all.gene_models.gff.gz
Proteins (fasta): A_antarctica_genome_bigger1kbp.all.maker.proteins.fasta.gz Transcripts/CDS (fasta): A_antarctica_genome_bigger1kbp.all.maker.transcripts.fasta.gz
