Difference between revisions of "Yam bean assembly"
From Applied Bioinformatics Group
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The raw sequencing reads are available at BIOPROJ123456789 | The raw sequencing reads are available at BIOPROJ123456789 | ||
| − | The draft assembly can be downloaded from | + | The draft assembly can be downloaded from here: |
| − | + | [http://appliedbioinformatics.com.au/download/yambean.scf.fasta.gz yambean.scf.fasta.gz] | |
| − | The SNPs (VCF) are | + | The annotation (GTF) is here: |
| + | |||
| + | [http://appliedbioinformatics.com.au/download/1000yambeanscaffold.gtf.gz 1000yambeanscaffold.gtf.gz] | ||
| + | |||
| + | The transcripts (fasta) are here: | ||
| + | |||
| + | [http://appliedbioinformatics.com.au/download/yambean_transcripts.fa.gz yambean_transcripts.fa.gz] | ||
| + | |||
| + | The SNPs (VCF) are here: | ||
| + | |||
| + | [http://appliedbioinformatics.com.au/download/yambean.vcf.gz yambean.vcf.gz] | ||
| + | |||
| + | The final filtered SNPs (VCF) are here: | ||
| + | |||
| + | [http://appliedbioinformatics.com.au/download/yambean_filtered.vcf.gz yambean_filtered.vcf.gz] | ||
Revision as of 13:16, 11 March 2021
This page provides access to The Yam bean genome assembly and annotation data for the paper Tay Fernandez et al 2021.
The raw sequencing reads are available at BIOPROJ123456789
The draft assembly can be downloaded from here:
The annotation (GTF) is here:
The transcripts (fasta) are here:
The SNPs (VCF) are here:
The final filtered SNPs (VCF) are here:
